Package: chkptstanr 0.2.0

Vencislav Popov

chkptstanr: Checkpoint MCMC Sampling with 'Stan'

Fit Bayesian models in Stan <doi:10.18637/jss.v076.i01> with checkpointing, that is, the ability to stop the MCMC sampler at will, and then pick right back up where the MCMC sampler left off. Custom 'Stan' models can be fitted, or the popular package 'brms' <doi:10.18637/jss.v080.i01> can be used to generate the 'Stan' code. This package is fully compatible with the R packages 'brms', 'posterior', 'cmdstanr', and 'bayesplot'.

Authors:Vencislav Popov [aut, cre, cph], Donald Williams [aut], Tyler Matta [aut], NWEA [cph]

chkptstanr_0.2.0.tar.gz
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chkptstanr.pdf |chkptstanr.html✨
chkptstanr/json (API)

# Install 'chkptstanr' in R:
install.packages('chkptstanr', repos = c('https://popov-lab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/venpopov/chkptstanr/issues

Pkgdown site:https://venpopov.github.io

On CRAN:

Conda:

4.80 score 8 stars 26 scripts 192 downloads 10 exports 80 dependencies

Last updated 1 years agofrom:94eea9a665 (on v0.2.0). Checks:1 OK, 8 ERROR. Indexed: no.

TargetResultLatest binary
Doc / VignettesOKMar 24 2025
R-4.5-winERRORMar 24 2025
R-4.5-macERRORMar 24 2025
R-4.5-linuxERRORMar 24 2025
R-4.4-winERRORMar 24 2025
R-4.4-macERRORMar 24 2025
R-4.4-linuxERRORMar 24 2025
R-4.3-winERRORMar 24 2025
R-4.3-macERRORMar 24 2025

Exports:chkpt_brmschkpt_setupchkpt_stancombine_chkpt_drawscreate_folderextract_chkpt_drawsextract_hmc_infoextract_stan_statemake_brmsfitreset_checkpoints

Dependencies:abindbackportsbayesplotBHbridgesamplingbrmsBrobdingnagcallrcheckmateclicodacodetoolscolorspacecrayondescdiffobjdigestdistributionaldplyrfansifarverfsfuturefuture.applygenericsggplot2ggridgesglobalsgluegridExtragtableinlineisobandlabelinglatticelifecyclelistenvloomagrittrMASSMatrixmatrixStatsmgcvmunsellmvtnormnleqslvnlmenumDerivparallellypillarpkgbuildpkgconfigplyrposteriorprocessxpsQuickJSRR6rbibutilsRColorBrewerRcppRcppEigenRcppParallelRdpackreshape2rlangrstanrstantoolsscalesStanHeadersstringistringrtensorAtibbletidyselectutf8vctrsviridisLitewaldowithr

checkpointing: brms

Rendered fromchkpt_brms.Rmdusingknitr::rmarkdownon Mar 24 2025.

Last update: 2024-02-27
Started: 2022-04-22

checkpointing: Stan

Rendered fromchkpt_stan.Rmdusingknitr::rmarkdownon Mar 24 2025.

Last update: 2024-02-27
Started: 2022-04-22